BisQue documentation
BisQue is an end-to-end platform for scientific images. Store and view them, annotate them with your team, and run reproducible analysis workflows that trace every result back to its inputs.
Explore the platform
Section titled “Explore the platform”Data & datasetsUpload images and scientific files, then organize them into datasets with metadata and permissions.Annotation projectsCoordinate collaborators, label sets, and annotation history with project roles and branches.Modules & workflowsConnect versioned analysis modules and rerun them with full provenance.How BisQue worksThe objects that connect data, annotation, and analysis.Developer referenceHTTP API conventions, authentication, and the OpenAPI contract.Self-hostingRun BisQue locally and find the services you need.
Quickstarts
Section titled “Quickstarts”Upload and view your first resourceCreate an annotation projectBuild and run a workflowAuthenticate a CLI or notebook
Working with an AI coding agent?
Every guide is also served as Markdown. Point your agent at /docs/llms.txt for the full index.